BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011H05SP1|AL426281
(769 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1553 1519 0.0
>3x_Contig1553
Length = 8593
Score = 1519 bits (765), Expect = 0.0
Identities = 767/769 (99%)
Strand = Plus / Minus
Query: 1 acggtcctattcctctcgtgcgttatcggctcgatattaattttacgtctacccatcgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8257 acggtcctattcctctcgtgcgttatcggctcgatattaattttacgtctacccatcgta 8198
Query: 61 tgctaaaagaaagaggtcttatgaaaacttgtggcgatgggaaaataaacaacgaaagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8197 tgctaaaagaaagaggtcttatgaaaacttgtggcgatgggaaaataaacaacgaaagaa 8138
Query: 121 tatcagaatcgaaaacgataccctataactcaattattcctaaccctgctaattcagtac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8137 tatcagaatcgaaaacgataccctataactcaattattcctaaccctgctaattcagtac 8078
Query: 181 gcttcactattctgtcttgaatgtagatccccaaatttagtaacgtcaacgtaaaccgat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8077 gcttcactattctgtcttgaatgtagatccccaaatttagtaacgtcaacgtaaaccgat 8018
Query: 241 aatagaatatgtaaacccttgttgtgttgggaaatctagcggattgaatcaactaataac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8017 aatagaatatgtaaacccttgttgtgttgggaaatctagcggattgaatcaactaataac 7958
Query: 301 gtacggaaaatgaaaaaaaaaagaagagagacagatcaatattaataacaatagtagtaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7957 gtacggaaaatgaaaaaaaaaagaagagagacagatcaatattaataacaatagtagtaa 7898
Query: 361 ttacagcgatttaatagctggcacgcgcgtttttgtcaataatgcactgagattttgaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7897 ttacagcgatttaatagctggcacgcgcgtttttgtcaataatgcactgagattttgaag 7838
Query: 421 tgaaagavagtgaggagtgagggaggtcgaaacagcgatgatttagaatgatatctcgac 480
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7837 tgaaagaaagtgaggagtgagggaggtcgaaacagcgatgatttagaatgatatctcgac 7778
Query: 481 ttgtttcctttggctacagttttacttaggcagatagtatggtgtgtagtaaaggagaga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7777 ttgtttcctttggctacagttttacttaggcagatagtatggtgtgtagtaaaggagaga 7718
Query: 541 actttcacttgctaaaaataaatttttcaactgtctatatactcatctgcattcaccgat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7717 actttcacttgctaaaaataaatttttcaactgtctatatactcatctgcattcaccgat 7658
Query: 601 gattacatatttcacggatcaatgaaccagtgggaaggcacgagagtacgaatgtattct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7657 gattacatatttcacggatcaatgaaccagtgggaaggcacgagagtacgaatgtattct 7598
Query: 661 gcactgtgttgaatagccacggtataagcgtaagtsgccacggaggcaggtacgctgagc 720
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 7597 gcactgtgttgaatagccacggtataagcgtaagtggccacggaggcaggtacgctgagc 7538
Query: 721 agcctgtcgtaagtcgaatgtgctctctcttgaaagtagtactccatcg 769
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7537 agcctgtcgtaagtcgaatgtgctctctcttgaaagtagtactccatcg 7489
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6879
Number of Sequences: 1807
Number of extensions: 6879
Number of successful extensions: 67
Number of sequences better than 1.0e-20: 1
length of query: 769
length of database: 10,358,551
effective HSP length: 16
effective length of query: 753
effective length of database: 10,329,639
effective search space: 7778218167
effective search space used: 7778218167
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)